The detailed information of tRNA gene sequence


Sequence ID>WENV170564405
Genome IDCZKM01000695
Search identical group
Phylum/Class[CZKM] soil metagenome genome assembly CiPEHR-AK-2010-FBin.17, contig:; soil
Species
Start position on genome 2241
End posion on genome 2331
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcattggcc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTTAAGGCACACGCCTGGAAAGCGTGCGTGGGCTTATACCCC
ACCCTGGGTTCAAATCCCAGTCTCTCCGCCA
Downstream region at tRNA end position 
atttcgaacc
Secondary structure (Cloverleaf model)
>WENV170564405	Ser	GGA
                   c      GCCA atttcgaacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     A
    G       G T C G       C T G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        A     CGTGGGCTTATACCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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