The detailed information of tRNA gene sequence


Sequence ID>WENV170564477
Genome IDCZKQ01000004
Search identical group
Phylum/Class[CZKQ] soil metagenome genome assembly CiPEHR-AK-2010-FBin.5, contig:; soil
Species
Start position on genome 23047
End posion on genome 22956
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttctgtagtc
tRNA gene sequence 
tGGAGAGTGAAGGGTGCCTGGTGGCCCTCGCGGTCTTCAAAACCGCCGTCGGCCGGCAAC
GGCCGGGATAGGTTCGATTCCTATCCTCTCCGCaaa
Downstream region at tRNA end position 
ttcaacctcg
Secondary structure (Cloverleaf model)
>WENV170564477	SeC(p)	TCA
                   c      Caaa ttcaacctcg
                     t + G
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    G     T A T C C     A
    C C G T        A      | | | | |     G
  T         G G G A       A T A G G     C
  G         | | | |                 T T
  G         C C C T
    T G G          C     CGTCGGCCGGCAACGGCCGGG
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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