The detailed information of tRNA gene sequence


Sequence ID>WENV170564580
Genome IDCZKS01000390
Search identical group
Phylum/Class[CZKS] soil metagenome genome assembly CiPEHR-AK-2010-FBin.18, contig:; soil
Species
Start position on genome 12426
End posion on genome 12332
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gaatcaccga
tRNA gene sequence 
GGAAGCTAGTCTTGGCCGGTGCTGGGCCTGGTCTTCAAAACCAGCGTGGGGCACTCCGTG
TCGCAGGTGGGTTCGACTCCCACTAGCTTCCGCCA
Downstream region at tRNA end position 
ggctaaatag
Secondary structure (Cloverleaf model)
>WENV170564580	SeC(p)	TCA
                   a      GCCA ggctaaatag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     T - A
                     A - T          T C
                    G     C A C C C     A
      C C G        T      | | | | |     G
    G       G T T C       G T G G G     C
    G       + + + |                 T T
    T       T G G G
      G C          C     CGTGGGGCACTCCGTGTCGCAG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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