The detailed information of tRNA gene sequence


Sequence ID>WENV170564969
Genome IDCZQD01000045
Search identical group
Phylum/Class[CZQD] hydrothermal vent metagenome; ocean water
Species
Start position on genome 4353
End posion on genome 4264
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caggctccgc
tRNA gene sequence 
GGAGAGGTGCTAGAGTGGTTGAATAGGCTAGTCTCGAAAACTAGTGAACTCGCAAGGGTT
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gccagactgc
Secondary structure (Cloverleaf model)
>WENV170564969	Ser	CGA
                   c      GCCA gccagactgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A T C       G A G G G     C
    G         | | |                 T T
    T       A T A G
      T G A        G     TGAACTCGCAAGGGTTCC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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