The detailed information of tRNA gene sequence


Sequence ID>WENV170564985
Genome IDCZQE01000079
Search identical group
Phylum/Class[CZQE] hydrothermal vent metagenome; ocean water
Species
Start position on genome 1122
End posion on genome 1214
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgccaggcc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAGCGGTTTGCTAAACCGCCGTACGGGGTTTACTC
GTACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gatttcgatc
Secondary structure (Cloverleaf model)
>WENV170564985	Ser	GCT
                   c      GCCA gatttcgatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACGGGGTTTACTCGTACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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