The detailed information of tRNA gene sequence


Sequence ID>WENV170565075
Genome IDCZRM01000350
Search identical group
Phylum/Class[CZRM] hydrothermal vent metagenome; ocean water
Species
Start position on genome 1489
End posion on genome 1397
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgggcccga
tRNA gene sequence 
GGAGAGGTGGCCGAGTCTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTATGGGTCAAAAGC
TCATCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tccgagtccc
Secondary structure (Cloverleaf model)
>WENV170565075	Ser	GCT
                   a      GCCA tccgagtccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  T         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T C G A        G     TATGGGTCAAAAGCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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