The detailed information of tRNA gene sequence


Sequence ID>WENV170565784
Genome IDFKKE01000797
Search identical group
Phylum/Class[FKKE] freshwater metagenome; freshwater
Species
Start position on genome 4378
End posion on genome 4281
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cttccccgga
tRNA gene sequence 
GGGGGCGGATCGGGCCTGGTGGTCCGGCCGGTCTTCAAAACCGCGACGGAGACGCCTTCG
GCAGCTCCGGTGGGTTCGATTCCCACACGCTCCCGCCA
Downstream region at tRNA end position 
ccttgttctt
Secondary structure (Cloverleaf model)
>WENV170565784	SeC(p)	TCA
                   a      GCCA ccttgttctt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       G G G C       G T G G G     C
    G       + | | |                 T T
    T       T C C G
      G G          G     GACGGAGACGCCTTCGGCAGCTCCG
                    C   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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