The detailed information of tRNA gene sequence


Sequence ID>WENV170566187
Genome IDFKKE01008690
Search identical group
Phylum/Class[FKKE] freshwater metagenome; freshwater
Species
Start position on genome 3490
End posion on genome 3401
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaattatcc
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTCGAAAGCGGCACCGTGCTAAGGTGTTAGAGATGAAAGTCTC
TCGTGGGTTCGAATCCCACCCTCTCCGCCT
Downstream region at tRNA end position 
tcgcctcgca
Secondary structure (Cloverleaf model)
>WENV170566187	Ser	GCT
                   c      GCCT tcgcctcgca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAGAGATGAAAGTCTCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  G       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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