The detailed information of tRNA gene sequence


Sequence ID>WENV170566432
Genome IDFKKE01027844
Search identical group
Phylum/Class[FKKE] freshwater metagenome; freshwater
Species
Start position on genome 642
End posion on genome 735
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgccgcacc
tRNA gene sequence 
GGAGAGATGCCCGAGAGGCCGAAGGGGGCGCCCTGCTAAGGCGTTATACGGGCTTAAACC
CGTATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gacaaactga
Secondary structure (Cloverleaf model)
>WENV170566432	Ser	GCT
                   c      GCCA gacaaactga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TATACGGGCTTAAACCCGTATC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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