The detailed information of tRNA gene sequence


Sequence ID>WENV170566474
Genome IDFKKE01034966
Search identical group
Phylum/Class[FKKE] freshwater metagenome; freshwater
Species
Start position on genome 37
End posion on genome 135
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cgcccactgc
tRNA gene sequence 
GGGAGTGCATCGCTGCTGGTGTGGCGCCTGGTCTTCAAAACCTGTGGGGTCTCTCCTCGA
GAGGGTCCCGGTGGGTTCGATTCCCATGCACTCCCGCCA
Downstream region at tRNA end position 
ctttctggca
Secondary structure (Cloverleaf model)
>WENV170566474	SeC(p)	TCA
                   c      GCCA ctttctggca
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    A     T A C C C     A
      T C G        T      + | | | |     G
    G       T C G C       G T G G G     C
    G       + | | |                 T T
    T       G G C G
      G T          C     TGGGGTCTCTCCTCGAGAGGGTCCCG
                    C - G
                    T   T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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