The detailed information of tRNA gene sequence


Sequence ID>WENV170566605
Genome IDFKKE01062924
Search identical group
Phylum/Class[FKKE] freshwater metagenome; freshwater
Species
Start position on genome 315
End posion on genome 224
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaacgatgtt
tRNA gene sequence 
GGAGAGATGTCTGAGTGGCCGAAAGAGCATGATTGGAAATCGTGTATGTCTCGAAAGGGG
CATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gtcttcgctc
Secondary structure (Cloverleaf model)
>WENV170566605	Ser	GGA
                   t      GCCA gtcttcgctc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         | | |                 T T
    C       A A G A
      C G A        G     TATGTCTCGAAAGGGGCATC
                    C - G
                    A - T
                    T + G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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