The detailed information of tRNA gene sequence


Sequence ID>WENV170573801
Genome IDFLYL01033032
Search identical group
Phylum/Class[FLYL] hot springs metagenome; Sediment
Species
Start position on genome 776
End posion on genome 679
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
acatcagagc
tRNA gene sequence 
GGAGGCGAATGAGGTCTGGTGACTTCCCCGGGCTTCAAACCCGGCGGGCGACGGCGAAAG
TCGGCGCTGGTGGGTTCGATTCCCACACGCCTCCGCCA
Downstream region at tRNA end position 
gggccaaagt
Secondary structure (Cloverleaf model)
>WENV170573801	SeC	TCA
                   c      GCCA gggccaaagt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A   A          T T
                    A     C A C C C     A
      T C T        T      | | | | |     G
    G       G G A G       G T G G G     C
    G       | + | |                 T T
    T       C T T C
      G A          C     CGGGCGACGGCGAAAGTCGGCGCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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