The detailed information of tRNA gene sequence


Sequence ID>WENV170574616
Genome IDFLYN01001180
Search identical group
Phylum/Class[FLYN] hot springs metagenome; Sediment
Species
Start position on genome 3322
End posion on genome 3413
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcctcggggt
tRNA gene sequence 
GGAGGCGAACGAGGGCTGGTGTCCTCCCCGGTCTTCAAAACCGGTGTGCCGGCGAGAGCC
GGCAGGCGGGTTCGATTCCCGTCCGCCTCCGCtc
Downstream region at tRNA end position 
gcgccgacct
Secondary structure (Cloverleaf model)
>WENV170574616	SeC(p)	TCA
                   t      GCtc gcgccgacct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A   C          T T
                    A     T G C C C     A
      T C G        C      + | | | |     G
    G       G G A G       G C G G G     C
    G       | | | |                 T T
    T       C C T C
      G T          C     TGTGCCGGCGAGAGCCGGCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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