The detailed information of tRNA gene sequence


Sequence ID>WENV170575603
Genome IDFPHF01000067
Search identical group
Phylum/Class[FPHF] hydrothermal vent metagenome genome assembly, contig: NODE_21.; water
Species
Start position on genome 40123
End posion on genome 40036
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cttcacaaat
tRNA gene sequence 
GGTTTCGTGTCCGAGTGGCCGATGGTGCATCCTTGGAAAGGATGTGTGGGGCAACCCACC
GAGAGTTCGAATCTCTCCGAGACCACCA
Downstream region at tRNA end position 
ccttcaatat
Secondary structure (Cloverleaf model)
>WENV170575603	Ser	GGA
                   t      ACCA ccttcaatat
                     G - C
                     G - C
                     T - A
                     T + G
                     T - A
                     C - G
                     G - C          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G A G     C
    G       + | |                   T T
    C       T G G T
      C G A        G     TGTGGGGCAACCCACC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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