The detailed information of tRNA gene sequence


Sequence ID>WENV170575698
Genome IDFPHJ01000024
Search identical group
Phylum/Class[FPHJ] hydrothermal vent metagenome genome assembly, contig: NODE_9.; water
Species
Start position on genome 11627
End posion on genome 11718
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tctgtttttt
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTGAAGGCGCGCCCCTGCTAAGGGTGTATAGGGTTTATCCCC
TATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttattgtttt
Secondary structure (Cloverleaf model)
>WENV170575698	Ser	GCT
                   t      GCCA ttattgtttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATAGGGTTTATCCCCTATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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