The detailed information of tRNA gene sequence


Sequence ID>WENV170575702
Genome IDFPHJ01000026
Search identical group
Phylum/Class[FPHJ] hydrothermal vent metagenome genome assembly, contig: NODE_9.; water
Species
Start position on genome 15533
End posion on genome 15458
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttgtttttt
tRNA gene sequence 
AGGCCAGTGGCTCAATTGGTAGAGTGGCGGTCTCCAAAACCGTTGGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tttaggaaaa
Secondary structure (Cloverleaf model)
>WENV170575702	Trp	CCA
                   t      GCCA tttaggaaaa
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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