The detailed information of tRNA gene sequence


Sequence ID>WENV170576004
Genome IDFPHX01000014
Search identical group
Phylum/Class[FPHX] hydrothermal vent metagenome genome assembly, contig: NODE_313.; water
Species
Start position on genome 2621
End posion on genome 2712
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttttctttt
tRNA gene sequence 
GGAGAGTTGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGTGTATAGGGTTTATCCCC
TATCGAGGGTTCAAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
ttattaaaaa
Secondary structure (Cloverleaf model)
>WENV170576004	Ser	GCT
                   t      GCCA ttattaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGTTTATCCCCTATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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