The detailed information of tRNA gene sequence


Sequence ID>WENV170576451
Genome IDFRDC01000632
Search identical group
Phylum/Class[FRDC] freshwater metagenome; water
Species
Start position on genome 254840
End posion on genome 254750
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggctactcgc
tRNA gene sequence 
GGAGAGATGGCCGAGCTGGTCGAAGGCACTCCCTTGCTAAGGGAGCAGACGGTAAAACGT
CTCGTGAGTTCGAATCTCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttttaaattt
Secondary structure (Cloverleaf model)
>WENV170576451	Ser	GCT
                   c      GCCA ttttaaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C T C     A
    T C G A        G      | | | | |     G
  G         G C C G       G T G A G     C
  G           | | |                 T T
  T         A G G C
    C G A          A     CAGACGGTAAAACGTCTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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