The detailed information of tRNA gene sequence


Sequence ID>WENV170576537
Genome IDFRDC01000810
Search identical group
Phylum/Class[FRDC] freshwater metagenome; water
Species
Start position on genome 12445
End posion on genome 12534
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctgtgccagt
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGCCGAATGGACTCGCCTCGAAAGCGGGCGTCCTCGCAAGGGGA
CCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
taccacacct
Secondary structure (Cloverleaf model)
>WENV170576537	Ser	CGA
                   t      GCCA taccacacct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G A C C       G T G G G     C
    G         | | |                 T T
    C       A T G G
      C G A        A     CGTCCTCGCAAGGGGACC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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