The detailed information of tRNA gene sequence


Sequence ID>WENV170576729
Genome IDFRDC01001557
Search identical group
Phylum/Class[FRDC] freshwater metagenome; water
Species
Start position on genome 27314
End posion on genome 27406
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccgcgcgct
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGTCGAAGGCGCGCCCCTGCTAAGGGCGTATACCCGTTAAACG
GTATCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
gaaaatcttc
Secondary structure (Cloverleaf model)
>WENV170576729	Ser	GCT
                   t      GCCA gaaaatcttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
    T C G A        G      + | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TATACCCGTTAAACGGTATC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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