The detailed information of tRNA gene sequence


Sequence ID>WENV170576841
Genome IDFRDC01001904
Search identical group
Phylum/Class[FRDC] freshwater metagenome; water
Species
Start position on genome 11850
End posion on genome 11763
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgtatttgcc
tRNA gene sequence 
GGAGAGGTGCCAGAGCGGTTGAACGGACTGGTCTCGAAAACCAGCATGGCCTTCGGGTCA
TCGGGAGTTCGAATCTCCCCCTCTCCGCtt
Downstream region at tRNA end position 
cacgaaccga
Secondary structure (Cloverleaf model)
>WENV170576841	Ser	CGA
                   c      GCtt cacgaaccga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        G      | | | | |     G
    G       G A C C       G G G A G     C
    G           | |                 T T
    T       A C G G
      T G A        A     CATGGCCTTCGGGTCATC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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