The detailed information of tRNA gene sequence


Sequence ID>WENV170577453
Genome IDFSSH01000025
Search identical group
Phylum/Class[FSSH] freshwater metagenome; drinking water
Species
Start position on genome 19346
End posion on genome 19255
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaatttaatt
tRNA gene sequence 
GGAAAGTTGTCAGAGTGGTAATGAGTATGTTTGCTAAACATAAGCCGGCACATCATATGA
CTGCATAGGTTCGAACCCTATACTTTCCGCCA
Downstream region at tRNA end position 
aacaaaaatt
Secondary structure (Cloverleaf model)
>WENV170577453	Ser	GCT
                   t      GCCA aacaaaaatt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     T - A          C A
                    T     T A T C C     A
        G A        G      | | | | |     G
      T     G A C T       A T A G G     C
      G       | | |                 T T
      G     A T G A
        T A        G     AGCCGGCACATCATATGACTGC
                    T - A
                    A - T
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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