The detailed information of tRNA gene sequence


Sequence ID>WENV170577536
Genome IDFSSH01000128
Search identical group
Phylum/Class[FSSH] freshwater metagenome; drinking water
Species
Start position on genome 33041
End posion on genome 32968
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cccctacaaa
tRNA gene sequence 
GGCTGCGTAGCAGAATGGTTATGCAGCGGCCTGCAAAGCCGTATATACCGGTTCGATTCC
GGTCGCAGCCTCCA
Downstream region at tRNA end position 
ttactacata
Secondary structure (Cloverleaf model)
>WENV170577536	Cys	GCA
                   a      TCCA ttactacata
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     G - C          T T
                    T     T G G C C     A
        A A        A      | | | | |     G
      T     G A C G       A C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     ATAT
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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