The detailed information of tRNA gene sequence


Sequence ID>WENV170577640
Genome IDFSSH01000340
Search identical group
Phylum/Class[FSSH] freshwater metagenome; drinking water
Species
Start position on genome 55877
End posion on genome 55790
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctgaacatta
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACGGCAACGTATC
GAGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
attaagcatc
Secondary structure (Cloverleaf model)
>WENV170577640	Ser	GGA
                   a      GCCA attaagcatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGGCAACGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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