The detailed information of tRNA gene sequence


Sequence ID>WENV170577710
Genome IDFSSH01000594
Search identical group
Phylum/Class[FSSH] freshwater metagenome; drinking water
Species
Start position on genome 54134
End posion on genome 54221
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttgaacttt
tRNA gene sequence 
GGAGACGTCGCATAGTGGTCGAGTGCGCTCGCTTGGAAAGCGAGTAGGGGTAACACCCTC
GCGAGTTCGAATCTCGCCGTCTCCGCAA
Downstream region at tRNA end position 
ttgttctaaa
Secondary structure (Cloverleaf model)
>WENV170577710	Ser	GGA
                   t      GCAA ttgttctaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C G C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G C G A G     C
    G       + | | |                 T T
    T       G T G C
      C G A        G     TAGGGGTAACACCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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