The detailed information of tRNA gene sequence


Sequence ID>WENV170577783
Genome IDFSSH01001175
Search identical group
Phylum/Class[FSSH] freshwater metagenome; drinking water
Species
Start position on genome 2868
End posion on genome 2776
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atacaggttc
tRNA gene sequence 
GGAGAGGTGGCAGAGTTGGTCGATCGCGTTGCACTCGAAATGCAAAGTGCCTCTTAAAGG
GCACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gtattcgaca
Secondary structure (Cloverleaf model)
>WENV170577783	Ser	CGA
                   c      GCCA gtattcgaca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G         +   | |                 T T
  T         T C G C
    C G A          G     AGTGCCTCTTAAAGGGCACC
                    T - A
                    T - A
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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