The detailed information of tRNA gene sequence


Sequence ID>WENV170577818
Genome IDFSSH01001590
Search identical group
Phylum/Class[FSSH] freshwater metagenome; drinking water
Species
Start position on genome 2003
End posion on genome 2098
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cgatacatat
tRNA gene sequence 
GGGGATGGAGCACTGCTGGTGTGGTGTGCGGTCTTCAAAACCGTTGCGGGGCAGGCCGAT
CCTGTCCTGGGTGGGTTCGATTCCCACGCATCCCCGact
Downstream region at tRNA end position 
gattaaatta
Secondary structure (Cloverleaf model)
>WENV170577818	SeC(p)	TCA
                   t      Gact gattaaatta
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G   G          T T
                    A     C A C C C     A
      T C G        G      | | | | |     G
    G       T C A C       G T G G G     C
    G       + | | |                 T T
    T       G G T G
      G T          T     TGCGGGGCAGGCCGATCCTGTCCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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