The detailed information of tRNA gene sequence


Sequence ID>WENV170577860
Genome IDFSSH01002106
Search identical group
Phylum/Class[FSSH] freshwater metagenome; drinking water
Species
Start position on genome 39107
End posion on genome 39196
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cacgacctgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATCGCGTCGCACTCGAAATGCGAAGTACTCGCAAGGGTA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ttaactgttc
Secondary structure (Cloverleaf model)
>WENV170577860	Ser	CGA
                   c      GCCA ttaactgttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     AGTACTCGCAAGGGTACC
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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