The detailed information of tRNA gene sequence


Sequence ID>WENV170578131
Genome IDFSSH01028810
Search identical group
Phylum/Class[FSSH] freshwater metagenome; drinking water
Species
Start position on genome 187
End posion on genome 113
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cggggccccg
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTAGAGCCAGCCGCTCATAACGGCCAGGTTGCGGGTTCGAATC
CTGCCGGGCCCACCA
Downstream region at tRNA end position 
aaaatgtctg
Secondary structure (Cloverleaf model)
>WENV170578131	Met	CAT
                   g      ACCA aaaatgtctg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C G T C C     A
        A A        A      | | + | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        C     AGGTT
                    A   C
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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