The detailed information of tRNA gene sequence


Sequence ID>WENV170636826
Genome IDJFBN01306816
Search identical group
Phylum/Class[JFBN] chicken gut metagenome; ceca of Broiler chicken
Species
Start position on genome 12570
End posion on genome 12657
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcagaatcg
tRNA gene sequence 
GGAGAAATACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGAAACCGG
CGCGAGGGTTCAAATCCCTCTTTCTCCGttt
Downstream region at tRNA end position 
gatgttatcc
Secondary structure (Cloverleaf model)
>WENV170636826	Ser	GCT
                   g      Gttt gatgttatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGAAACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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