The detailed information of tRNA gene sequence


Sequence ID>WENV170637768
Genome IDJFBN01359390
Search identical group
Phylum/Class[JFBN] chicken gut metagenome; ceca of Broiler chicken
Species
Start position on genome 1378
End posion on genome 1465
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcagaatca
tRNA gene sequence 
GGAGAAATACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGGAAACCGG
CGCGAGGGTTCAAATCCCTCTTTCTCCGttt
Downstream region at tRNA end position 
gatattatct
Secondary structure (Cloverleaf model)
>WENV170637768	Ser	GCT
                   a      Gttt gatattatct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGAAACCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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