The detailed information of tRNA gene sequence


Sequence ID>WENV170638599
Genome IDJFBN01497960
Search identical group
Phylum/Class[JFBN] chicken gut metagenome; ceca of Broiler chicken
Species
Start position on genome 271
End posion on genome 179
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccaataatgc
tRNA gene sequence 
GAGGGATTACCCAAGTCCGGCTGAAGGGATCGGTCTTGAAAACCGACAGGGGATTAACGT
CCCGCGGGGGTTCGAATCCCTCATCCCTCGCCA
Downstream region at tRNA end position 
tttatttaaa
Secondary structure (Cloverleaf model)
>WENV170638599	Ser	TGA
                   c      GCCA tttatttaaa
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
    C T G A        A      | + | | |     G
  C         A C C C       G G G G G     C
  G           | | |                 T T
  G         A G G G
    C T G A        A     CAGGGGATTAACGTCCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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