The detailed information of tRNA gene sequence


Sequence ID>WENV170639041
Genome IDJFJP01000012
Search identical group
Phylum/Class[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
Species
Start position on genome 4692
End posion on genome 4617
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctcttgatat
tRNA gene sequence 
AGGGGAGTAGCTCAGTTGGCAGAGCAGCGGACTCCAAATCCGCAGGTCGCAGGTTCGACC
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
cttcgtgctt
Secondary structure (Cloverleaf model)
>WENV170639041	Trp	CCA
                   t      GCCA cttcgtgctt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          C C
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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