The detailed information of tRNA gene sequence


Sequence ID>WENV170639042
Genome IDJFJP01000017
Search identical group
Phylum/Class[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
Species
Start position on genome 19120
End posion on genome 19194
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gactggccgc
tRNA gene sequence 
GGGCGTATAACTCAGCGGTAGAGTGCTATCTTCACACGGTAGAAGTCCCAGGTTCGAACC
CTGGTACGCCCACCA
Downstream region at tRNA end position 
ctcaagcccc
Secondary structure (Cloverleaf model)
>WENV170639042	Val	CAC
                   c      ACCA ctcaagcccc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     A - T          C A
                    T     G G T C C     A
        G A        A      | | | | |     G
      C     C T C A       C C A G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    T + G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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