The detailed information of tRNA gene sequence


Sequence ID>WENV170639377
Genome IDJFJP01002159
Search identical group
Phylum/Class[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
Species
Start position on genome 11174
End posion on genome 11258
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cccggtccct
tRNA gene sequence 
GCCGGGATGGCGGAATCGGTAGACGCAGCGGATTCAAAATCCGCCGCCGCAAGGTGTGTG
GGTTCGAGTCCCACTCCCGGTACCA
Downstream region at tRNA end position 
ggtggttgct
Secondary structure (Cloverleaf model)
>WENV170639377	Leu	CAA
                   t      ACCA ggtggttgct
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    C       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCGCAAGGTGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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