The detailed information of tRNA gene sequence


Sequence ID>WENV170639447
Genome IDJFJP01002879
Search identical group
Phylum/Class[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
Species
Start position on genome 4510
End posion on genome 4434
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccgcttaagt
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGTACTGCGTTCGGGACGCAGGAGTCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
gcaacgtttg
Secondary structure (Cloverleaf model)
>WENV170639447	Pro	CGG
                   t      ACCA gcaacgtttg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        A     GAGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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