The detailed information of tRNA gene sequence


Sequence ID>WENV170640622
Genome IDJFJP01023572
Search identical group
Phylum/Class[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
Species
Start position on genome 8154
End posion on genome 8244
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccatcccct
tRNA gene sequence 
GGAGGGTTGGCAGAGCTGGTTGATTGCACCGGTCTTGAAAACCGGCATGCCTTTGCGGGC
ATCTGGGGTTCGAATCCCTAACCCTCCGCCA
Downstream region at tRNA end position 
tttgtacatg
Secondary structure (Cloverleaf model)
>WENV170640622	Ser	TGA
                   t      GCCA tttgtacatg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     A T C C C     A
    T C G A        G      | + | | |     G
  G         G A C G       T G G G G     C
  G         + | | |                 T T
  T         T T G C
    T G A          A     CATGCCTTTGCGGGCATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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