The detailed information of tRNA gene sequence


Sequence ID>WENV170640623
Genome IDJFJP01023573
Search identical group
Phylum/Class[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
Species
Start position on genome 1765
End posion on genome 1840
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gcatctcctc
tRNA gene sequence 
GGGCGATTAACTCAGCGGTGAGAGTGCCACCTTCACACGGTGGAAGTCACAGGTTCAAAT
CCTGTATCGCCCACCA
Downstream region at tRNA end position 
ccgaccgtac
Secondary structure (Cloverleaf model)
>WENV170640623	Val	CAC
                   c      ACCA ccgaccgtac
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G T C C     A
      C G A        A      | | | | |     A
    G       C T C A       A C A G G     C
    G       | | | |                 T T
    T       G A G T
      G A          G     AAGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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