The detailed information of tRNA gene sequence


Sequence ID>WENV170640680
Genome IDJFJP01023938
Search identical group
Phylum/Class[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
Species
Start position on genome 1522
End posion on genome 1446
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cattcaatgt
tRNA gene sequence 
GTCAAGGTAGCTCAGCTGGTTAGAGCGCTGGTCTCATAAGCCGGAGGTCGAGGGTTCGAG
TCCCTCTCTTGACACCA
Downstream region at tRNA end position 
ttacaaattc
Secondary structure (Cloverleaf model)
>WENV170640680	Met	CAT
                   t      ACCA ttacaaattc
                     G - C
                     T - A
                     C - G
                     A - T
                     A - T
                     G - C
                     G + T          T G
                    T     C T C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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