The detailed information of tRNA gene sequence


Sequence ID>WENV170641821
Genome IDJFJP01037725
Search identical group
Phylum/Class[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
Species
Start position on genome 12557
End posion on genome 12480
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aagatattgc
tRNA gene sequence 
GTCCCCATCGTCTAGCCCGGTCCAGGACATCGCCCTTTCACGGCGACGACAGGGGTTCGA
ATCCCCTTGGGGACGCCA
Downstream region at tRNA end position 
attttacccc
Secondary structure (Cloverleaf model)
>WENV170641821	Glu	TTC
                   c      GCCA attttacccc
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
    C C G A        C      | | | | |     G
  C         T C T G       A G G G G     C
  G         + | | |                 T T
  G         G G A C
    T C C A        A     CGAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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