The detailed information of tRNA gene sequence


Sequence ID>WENV170642688
Genome IDJFJP01043419
Search identical group
Phylum/Class[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
Species
Start position on genome 2598
End posion on genome 2674
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaacccaaat
tRNA gene sequence 
GGGGTCGTAGTTCAGTTGGTTAGAATGCCGGCCTGTCACGCCGGATGTCGCCGGTTCGAG
CCCGGTCGGCCCCGCCA
Downstream region at tRNA end position 
gcaaatacaa
Secondary structure (Cloverleaf model)
>WENV170642688	Asp	GTC
                   t      GCCA gcaaatacaa
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          C G
                    T     T G G C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C C G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     ATGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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