The detailed information of tRNA gene sequence


Sequence ID>WENV170642905
Genome IDJFJP01046827
Search identical group
Phylum/Class[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
Species
Start position on genome 4711
End posion on genome 4785
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
accagtatat
tRNA gene sequence 
GGCTCTCTAGTCTAAAGGCAAGATGCAGGATTCCAAATCCTTGCGATGTGGGTTCGAGTC
CTACGGGGGTTGCCA
Downstream region at tRNA end position 
tacagaaata
Secondary structure (Cloverleaf model)
>WENV170642905	Trp	CCA
                   t      GCCA tacagaaata
                     G + T
                     G + T
                     C - G
                     T + G
                     C - G
                     T + G
                     C - G          T G
                    T     C A T C C     A
        A A        A      | | + | |     G
      A     T C T G       G T G G G     C
      G     | | | +                 T T
      G     A G A T
        C A        G     GCGAT
                    C   T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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