The detailed information of tRNA gene sequence


Sequence ID>WENV170643072
Genome IDJFJP01049285
Search identical group
Phylum/Class[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
Species
Start position on genome 5031
End posion on genome 5102
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttacacggct
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCCACGCGGTTGATTGCAGATCAACTACACTCCGGTTCAAATC
CGGACCTTGGCTtcc
Downstream region at tRNA end position 
actgaattgc
Secondary structure (Cloverleaf model)
>WENV170643072	Cys	GCA
                   t      Ttcc actgaattgc
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     A G G C C     A
        G A        G      | | | | |     A
      C     G G C G       T C C G G     C
      G       | | |                 T T
      G     A C G C
        C C        G     TACAC
                    G - C
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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