The detailed information of tRNA gene sequence


Sequence ID>WENV170643490
Genome IDJFJP01057660
Search identical group
Phylum/Class[JFJP] microbial mat metagenome; purple microbial (photo- and chemosynthetic) mats found in low-oxygen high-sulfur sink
Species
Start position on genome 4316
End posion on genome 4403
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgccttaaa
tRNA gene sequence 
GGAGAGATGGCAGAGCGGTTTAATGCGGCGGTCTTGAAAACCGTTGTGGGTTATACCACC
GGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
agtccgatga
Secondary structure (Cloverleaf model)
>WENV170643490	Ser	TGA
                   a      GCCA agtccgatga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T T A        G     TGTGGGTTATACCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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