The detailed information of tRNA gene sequence


Sequence ID>WENV170643604
Genome IDJMBV01000002
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 25667
End posion on genome 25746
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
actggagtta
tRNA gene sequence 
CGGGGCGTGGCTCAGTTTGGTAGAGCGTCGCGTTCGGGACGCGAAGGCCGCACGTTCAAA
TCGTGTCGCCCCCCCGACCA
Downstream region at tRNA end position 
tctttaatta
Secondary structure (Cloverleaf model)
>WENV170643604	Pro	CGG
                   a      ACCA tctttaatta
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C   C
                     G - C          T G
                    T     C G C T G     C
      T G A        G              |     T
    T       C T C G       C G T T C     A
    T       | | | |                 A A
    G       G A G C
      G T A        G     AGGCCGCA
                    T - A
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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