The detailed information of tRNA gene sequence


Sequence ID>WENV170643651
Genome IDJMBV01000031
Search identical group
Phylum/Class[JMBV] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 50404
End posion on genome 50480
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtacgtataa
tRNA gene sequence 
GGGCTCGTAGCTCAGTTGGTTAGAGCTTCCGGCTCATAACCGGGTGGTCGGTGGTTCGAA
TCCACCCGAGCCCACCA
Downstream region at tRNA end position 
ataaaagccg
Secondary structure (Cloverleaf model)
>WENV170643651	Met	CAT
                   a      ACCA ataaaagccg
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     TGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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