The detailed information of tRNA gene sequence


Sequence ID>WENV170644886
Genome IDJMBX01000020
Search identical group
Phylum/Class[JMBX] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 14645
End posion on genome 14733
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tctcctgcct
tRNA gene sequence 
GGAGAGATGCTCGAGTGGTTGAAGAGGCACGCCTGGAAAGCGTGTATACGCCAAAAGTGT
ATCGCGGGTTCGAATCCCGCTCTCTCCGCac
Downstream region at tRNA end position 
cctcgtaaaa
Secondary structure (Cloverleaf model)
>WENV170644886	Ser	GGA
                   t      GCac cctcgtaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G C G G G     C
    G         | | |                 T T
    T       A G A G
      T G A        G     TATACGCCAAAAGTGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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