The detailed information of tRNA gene sequence


Sequence ID>WENV170645006
Genome IDJMBX01000911
Search identical group
Phylum/Class[JMBX] anaerobic digester metagenome; mesophilic anaerobic digester inoculated with municipal waste water sludge and fed with
Species
Start position on genome 3860
End posion on genome 3935
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cagggtttat
tRNA gene sequence 
ACGGGTCTAGCTCAGTCGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGGGAGTTCGAGT
CTCTCGACCCGTGCAA
Downstream region at tRNA end position 
aacgatccga
Secondary structure (Cloverleaf model)
>WENV170645006	Trp	CCA
                   t      GCAA aacgatccga
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    C       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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