The detailed information of tRNA gene sequence


Sequence ID>WENV170645723
Genome IDJPYU01021170
Search identical group
Phylum/Class[JPYU] wastewater metagenome; domestic wastewater sediment without any treatment
Species
Start position on genome 222
End posion on genome 151
Amino Acid Sup
Anticodon CTA
Upstream region at tRNA start position 
agatagctta
tRNA gene sequence 
TCCTCGGTCGTTCAATGGTTAGGACATCGGACTCTAAATCCGAGAACCAGGGTTCGATTC
CCTGTCGAGGAGttt
Downstream region at tRNA end position 
ttttattatc
Secondary structure (Cloverleaf model)
>WENV170645723	Sup	CTA
                   a      Gttt ttttattatc
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G + T          T T
                    T     G T C C C     A
      T A A        C      | | | | |     G
    G       C T T G       C A G G G     C
    G       | + | |                 T T
    T       G G A C
      T A          A     GAAC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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