The detailed information of tRNA gene sequence


Sequence ID>WENV170645814
Genome IDJPYU01087352
Search identical group
Phylum/Class[JPYU] wastewater metagenome; domestic wastewater sediment without any treatment
Species
Start position on genome 146
End posion on genome 72
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttttaacaa
tRNA gene sequence 
ACGGGCGTAGTACAAGGGCTAGTATAGTGGTCTCCAAAACCATTGATGGGGGTTCGAATC
CCTCCGCCCGTGCAA
Downstream region at tRNA end position 
ataaagatta
Secondary structure (Cloverleaf model)
>WENV170645814	Trp	CCA
                   a      GCAA ataaagatta
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      G A A        A      | + | | |     G
    G       C A T G       G G G G G     C
    G       | | | +                 T T
    C       G T A T
      T A          A     TGAT
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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